STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103823843Programmed cell death 1 ligand 1 isoform X2. (312 aa)    
Predicted Functional Partners:
PDCD1
Programmed cell death protein 1.
  
 0.999
CD80
T-lymphocyte activation antigen CD80.
   
 0.972
CD4
T-cell surface glycoprotein CD4.
     
 0.720
CTLA4
Cytotoxic T-lymphocyte-associated protein 4.
   
 
 0.694
CD86
T-lymphocyte activation antigen CD86.
  
  
0.664
LOC103814481
Inducible T-cell costimulator-like.
   
  
 0.638
CD3E
T-cell surface glycoprotein CD3 epsilon chain.
   
 
 0.623
LOC103822979
T-cell surface glycoprotein CD3 gamma chain-like.
   
 
 0.585
CD247
T-cell surface glycoprotein CD3 zeta chain isoform X1.
     
 0.583
ENSSCAP00000020530
annotation not available
   
  
 0.557
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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