Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
FBXL5F-box and leucine-rich repeat protein 5. (634 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1.
    
 0.993
IREB2
Iron-responsive element-binding protein 2 isoform X1.
    
 0.990
CUL1
Cullin-1 isoform X1.
    
 0.987
ACO1
Cytoplasmic aconitate hydratase isoform X2.
    
 0.961
CIAO2B
Cytosolic iron-sulfur assembly component 2B.
    
 
 0.951
EFHB
EF-hand domain-containing family member B.
      
 0.870
CUL3
Cullin 3.
    
 0.788
FBXO11
F-box only protein 11 isoform X1.
     
 0.777
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.739
FBXO45
LOW QUALITY PROTEIN: F-box/SPRY domain-containing protein 1.
     
 0.712
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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