Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TFAP2ATranscription factor AP-2-alpha isoform X1. (424 aa)    
Predicted Functional Partners:
TFAP2D
Transcription factor AP-2 delta.
   
  0.781
TFAP2C
LOW QUALITY PROTEIN: transcription factor AP-2 gamma.
   
 0.640
CITED2
LOW QUALITY PROTEIN: cbp/p300-interacting transactivator 2.
    
 0.619
KCTD1
BTB/POZ domain-containing protein KCTD1 isoform X2.
   
 0.596
KCTD15
BTB/POZ domain-containing protein KCTD15 isoform X1.
   
 0.596
WWOX
WW domain-containing oxidoreductase.
    
 0.578
ENSSCAP00000023204
annotation not available
   
  0.553
YEATS4
YEATS domain-containing protein 4.
    
 0.550
CBFA2T2
CBFA2/RUNX1 translocation partner 2.
     
 0.542
ISL1
LOW QUALITY PROTEIN: insulin gene enhancer protein ISL-1.
   
  
 0.529
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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