STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC1A4Solute carrier family 1 (neutral amino acid transporter), member 4. (531 aa)    
Predicted Functional Partners:
SLC7A5
Solute carrier family 7 (L-type amino acid transporter), member 5.
  
 
 0.822
SLC38A4
Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 4.
   
  
 0.704
SLC7A1
Solute carrier family 7 (cationic amino acid transporter), member 1.
  
 
 0.696
SLC7A2
Solute carrier family 7 (cationic amino acid transporter), member 2.
  
 
 0.696
SLC3A1
Solute carrier family 3 (neutral and basic amino acid transporter), member 1.
   
 
 0.694
NUDCD1
NudC domain-containing protein 1.
    
   0.651
RHOH
Rho-related GTP-binding protein RhoH isoform X1.
    
 0.646
MTR
5-methyltetrahydrofolate--homocysteine methyltransferase.
     
 0.640
SLC6A15
Solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20.
     
 0.626
SLC16A1
MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 1.
      
 0.606
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.