STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN7L2Ataxin 7 like 2. (620 aa)    
Predicted Functional Partners:
USP22
Ubiquitin carboxyl-terminal hydrolase 22 isoform X1.
    
 0.861
TADA3
Transcriptional adapter 3.
    
 0.858
SGF29
SAGA-associated factor 29 isoform X1.
    
 0.858
TAF9
Transcription initiation factor TFIID subunit 9B isoform X1.
    
 0.856
ATXN7L3
SAGA-associated factor 11.
    
 0.856
TAF10
LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 10.
    
 0.855
TADA2B
Transcriptional adapter 2-beta.
    
 0.834
TAF12
Transcription initiation factor TFIID subunit 12.
   
 0.801
KAT2A
Histone acetyltransferase KAT2A.
    
 0.800
KAT2B
Histone acetyltransferase KAT2B isoform X2.
    
 0.800
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.