STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP68Centrosomal protein of 68 kDa isoform X1. (748 aa)    
Predicted Functional Partners:
TMEM116
Transmembrane protein 116 isoform X1.
      
 0.685
ENSSCAP00000012031
annotation not available
      
 0.541
LDAH
Lipid droplet-associated hydrolase.
      
 0.532
ENSSCAP00000022102
Von Hippel-Lindau disease tumor suppressor-like.
    
 
 0.471
ENSSCAP00000018218
annotation not available
  
     0.454
LOC103823190
KRAB domain-containing zinc finger protein.
  
     0.442
IL22RA1
Interleukin-22 receptor subunit alpha-1 isoform X1.
  
     0.440
ENSSCAP00000013074
annotation not available
  
     0.440
WIPF1
WAS/WASL-interacting protein family member 1.
      
 0.438
CAND1
Cullin-associated NEDD8-dissociated protein 1 isoform X1.
      
 0.433
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.