Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYPL2Synaptophysin-like protein 2. (287 aa)    
Predicted Functional Partners:
VAMP1
LOW QUALITY PROTEIN: vesicle-associated membrane protein 1.
   
 0.712
VAMP2
Vesicle-associated membrane protein 2 isoform X1.
   
 0.712
PSMA5
Proteasome 20S subunit alpha 5.
      
 0.605
SNAP25
Synaptosomal-associated protein 25 isoform X1.
   
 0.585
MFSD12
LOW QUALITY PROTEIN: major facilitator superfamily domain-containing protein 12.
   
   0.545
GPHN
Gephyrin.
      
 0.537
BDNF
Brain-derived neurotrophic factor isoform X2.
      
 0.529
MTM1
Myotubularin isoform X1.
      
 0.528
MOB3C
MOB kinase activator 3C.
      
 0.527
SYNC
Syncoilin 1.
    
 
 0.527
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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