STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3orf18Uncharacterized protein C3orf18 homolog. (156 aa)    
Predicted Functional Partners:
PAM16
Mitochondrial import inner membrane translocase subunit TIM16.
   
 0.801
HEATR1
U3 small nucleolar RNA-associated protein 10.
   
  
 0.692
TIMM17A
Mitochondrial import inner membrane translocase subunit Tim17-A.
   
 0.677
HSPA9
Stress-70 protein, mitochondrial isoform X2.
    
 0.674
ENSSCAP00000004080
Mitochondrial import inner membrane translocase subunit TIM23.
   
 0.655
MRPL45
39S ribosomal protein L45, mitochondrial.
   
  
 0.654
WIPF2
WAS/WASL interacting protein family member 2.
      
 0.615
MCFD2
Multiple coagulation factor deficiency protein 2 isoform X1.
      
 0.614
DEXI
Dexamethasone-induced protein.
      
 0.610
ENSSCAP00000008046
annotation not available
    
 0.592
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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