Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ELAVL1ELAV like RNA binding protein 1. (364 aa)    
Predicted Functional Partners:
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
  
0.937
DHX9
ATP-dependent RNA helicase A isoform X1.
   
 0.917
AGO2
Eukaryotic translation initiation factor 2C.
   
 
 0.901
PTBP2
Polypyrimidine tract-binding protein 2 isoform X2.
   
 0.896
ENSSCAP00000001280
annotation not available
   
 0.892
LOC103823413
Heterogeneous nuclear ribonucleoprotein K-like isoform X2.
   
 
 0.859
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 
 0.859
PRKCD
Protein kinase C delta type isoform X1.
    
 0.855
PRKCQ
Novel protein kinase C theta type.
    
 0.855
RBFOX2
RNA binding protein fox-1 homolog 2 isoform X7.
  
 
 0.839
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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