STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSMA5Proteasome 20S subunit alpha 5. (235 aa)    
Predicted Functional Partners:
PSMB1
Proteasome subunit beta type-1.
   
 0.999
PSMA1
Proteasome subunit alpha type-1.
  
0.999
PSMA3
Proteasome subunit alpha type-3.
  
0.999
PSMB3
Proteasome subunit beta type-3.
   
 0.999
PSMA6
Proteasome subunit alpha type-6.
   
0.999
PSMA4
Proteasome subunit alpha type-4 isoform X1.
  
0.999
PSMA7
Proteasome subunit alpha type-7.
  
0.999
PSMB2
Proteasome subunit beta type-2.
   
 0.999
PSMA2
Proteasome subunit alpha type-2.
  
0.999
PSMB4
Proteasome subunit beta type-4.
   
 0.999
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.