STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM115Transmembrane protein 115. (574 aa)    
Predicted Functional Partners:
COG2
Conserved oligomeric Golgi complex subunit 2 isoform X1.
   
 
  0.825
COG7
Conserved oligomeric Golgi complex subunit 7.
     
 0.815
COG8
Conserved oligomeric Golgi complex subunit 8.
     
 0.815
COG1
Conserved oligomeric Golgi complex subunit 1 isoform X1.
     
 0.813
COG5
Conserved oligomeric Golgi complex subunit 5.
     
 0.812
COG3
Conserved oligomeric Golgi complex subunit 3 isoform X2.
     
 0.812
COG6
Conserved oligomeric Golgi complex subunit 6 isoform X1.
     
 0.809
MUL1
LOW QUALITY PROTEIN: mitochondrial ubiquitin ligase activator of NFKB 1.
   
    0.587
BET1
Blocked early in transport 1.
   
 
  0.546
CAPZA1
Capping protein (actin filament) muscle Z-line, alpha.
   
 
  0.501
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.