Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TMEM115Transmembrane protein 115. (574 aa)    
Predicted Functional Partners:
MUL1
LOW QUALITY PROTEIN: mitochondrial ubiquitin ligase activator of NFKB 1.
   
    0.708
UBL7
Ubiquitin-like protein 7 isoform X1.
      
 0.693
NDUFAF6
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1.
      
 0.682
TMEM184A
Transmembrane protein 184A isoform X3.
      
 0.608
FAM8A1
Protein FAM8A1.
      
 0.603
DCTN4
Dynactin subunit 4 isoform X1.
     
  0.602
PPM1H
Protein phosphatase 1H.
      
 0.598
COG2
Conserved oligomeric Golgi complex subunit 2 isoform X1.
   
 
  0.598
DEPDC5
GATOR complex protein DEPDC5 isoform X4.
     
  0.595
COPB1
Coatomer subunit beta.
   
 
  0.581
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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