STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOL7Nucleolar protein 7. (252 aa)    
Predicted Functional Partners:
UTP4
U3 small nucleolar RNA-associated protein 4 homolog.
    
   0.819
WDR43
WD repeat domain 43.
    
   0.798
WDR75
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17).
    
   0.785
UTP15
U3 small nucleolar RNA-associated protein 15 homolog.
    
   0.777
NOL11
Nucleolar protein 11.
    
   0.777
FCF1
U3 small nucleolar RNA-associated protein 24.
   
 
 0.681
RPS5
Small subunit ribosomal protein S5e.
   
 
 0.598
RPS7
Ribosomal protein S7.
    
 
 0.565
UTP11
UTP11 small subunit processome component.
   
   0.547
EMG1
RRNA small subunit pseudouridine methyltransferase Nep1.
   
   0.543
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.