STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOL7Nucleolar protein 7. (252 aa)    
Predicted Functional Partners:
UTP4
U3 small nucleolar RNA-associated protein 4 homolog.
    
 
 0.950
NOL11
Nucleolar protein 11.
    
 
 0.904
WDR43
WD repeat domain 43.
    
 
 0.902
UTP15
U3 small nucleolar RNA-associated protein 15 homolog.
    
 
 0.878
WDR75
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17).
    
   0.846
FCF1
U3 small nucleolar RNA-associated protein 24.
   
 
 0.794
HEATR1
U3 small nucleolar RNA-associated protein 10.
    
 
 0.738
UTP20
Small subunit processome component 20 homolog.
    
 
 0.738
MTMR14
Myotubularin-related protein 14.
      
 0.685
RFWD3
E3 ubiquitin-protein ligase RFWD3.
      
 0.682
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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