STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001188annotation not available (64 aa)    
Predicted Functional Partners:
NPRL3
Nitrogen permease regulator 3-like protein.
   
 0.977
DEPDC5
GATOR complex protein DEPDC5 isoform X4.
    
 0.968
WDR24
WD repeat-containing protein 24.
    
 0.958
WDR59
GATOR complex protein WDR59 isoform X2.
    
 0.954
SEH1L
Nucleoporin SEH1 isoform X1.
   
 0.950
MIOS
WD repeat-containing protein mio.
    
 0.950
ITFG2
KICSTOR complex protein ITFG2.
    
 0.948
C12orf66
KICSTOR complex protein C12orf66 homolog isoform X1.
    
 0.940
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.905
SEC13
Protein transport protein SEC13.
    
 0.905
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.