STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SORBS1Sorbin and SH3 domain containing 1. (1243 aa)    
Predicted Functional Partners:
VCL
Vinculin isoform X2.
   
 0.886
VTA1
Vacuolar protein sorting-associated protein VTA1 homolog isoform X1.
    
 
 0.663
GCH1
GTP cyclohydrolase IA.
    
   0.661
ITGA1
Integrin alpha 1.
     
 0.654
CBL
E3 ubiquitin-protein ligase CBL.
    
 
 0.570
CBLB
E3 ubiquitin-protein ligase CBL-B isoform X1.
    
 
 0.570
ITGB5
Integrin beta 5.
     
 0.567
PXN
Paxillin.
   
 0.565
LPXN
Leupaxin.
   
 0.565
DLG5
Disks large homolog 5 isoform X1.
    
 0.562
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.