STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001199annotation not available (77 aa)    
Predicted Functional Partners:
SEC63
Translocation protein SEC63 homolog.
    
 0.999
ENSSCAP00000002922
annotation not available
   
  0.989
SEC61G
Protein transport protein SEC61 subunit gamma and related proteins.
   
 0.967
SEC62
Translocation protein SEC62.
    
 0.879
SSR3
LOW QUALITY PROTEIN: translocon-associated protein subunit gamma.
   
  0.874
DAD1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1.
   
 
 0.865
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit.
   
 0.851
SEC61A1
Protein transport protein SEC61 subunit alpha.
   
 0.845
SEC61A2
Protein transport protein SEC61 subunit alpha.
   
 0.845
RPN1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1.
   
 0.834
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.