STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GK5Putative glycerol kinase 5. (486 aa)    
Predicted Functional Partners:
GPD2
Glycerol-3-phosphate dehydrogenase, mitochondrial isoform X2.
 0.929
PM20D1
N-fatty-acyl-amino acid synthase/hydrolase PM20D1.
   
  
 0.687
MDN1
Midasin isoform X1.
   
 
 0.649
LOC103820686
Aquaporin-7-like isoform X1.
  
 
 0.634
ATAD3A
ATPase family AAA domain-containing protein 3A/B.
   
  
 0.629
HABP4
Intracellular hyaluronan-binding protein 4 isoform X1.
    
 
 0.614
ABCF3
ATP-binding cassette sub-family F member 3 isoform X1.
    
 
 0.612
NOC4L
U3 small nucleolar RNA-associated protein 19.
      
 0.607
CYP20A1
Cytochrome P450 family 20 subfamily A.
    
 
 0.605
EAPP
E2F-associated phosphoprotein.
   
  
 0.605
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.