Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
C1DNuclear nucleic acid-binding protein C1D. (148 aa)    
Predicted Functional Partners:
EXOSC10
Exosome complex exonuclease RRP6.
   
 0.999
MPHOSPH6
M-phase phosphoprotein 6, animal type.
   
 0.998
EXOSC1
Exosome complex component CSL4 isoform X1.
   
 0.995
EXOSC9
Exosome complex component RRP45.
   
 0.994
EXOSC7
Exosome complex component RRP42.
   
 0.994
EXOSC3
Exosome component 3.
   
 0.994
EXOSC2
Exosome complex component RRP4.
   
 0.994
EXOSC8
Exosome complex component RRP43.
   
 0.993
MTREX
Exosome RNA helicase MTR4 isoform X1.
   
 0.988
ZFC3H1
Zinc finger C3H1 domain-containing protein isoform X1.
    
 0.972
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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