STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001231annotation not available (504 aa)    
Predicted Functional Partners:
ENSSCAP00000002922
annotation not available
   
  0.842
RANBP2
RAN binding protein 2.
   
 
  0.564
ASF1A
Histone chaperone ASF1A.
    
 0.469
RPS15
Small subunit ribosomal protein S15e.
   
  0.457
RPS11
Small subunit ribosomal protein S11e.
   
 0.445
RPS2
Small subunit ribosomal protein S2e.
   
  0.417
RPS7
Ribosomal protein S7.
   
 0.413
RPSA
Small subunit ribosomal protein SAe.
   
 0.412
RPS3
Small subunit ribosomal protein S3e.
   
  0.411
RPS4X
40S ribosomal protein S4, X isoform.
   
  0.410
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.