Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TUSC2Tumor suppressor 2, mitochondrial calcium regulator. (109 aa)    
Predicted Functional Partners:
TBCK
TBC domain-containing protein kinase-like protein.
    
   0.718
SUFU
SUFU negative regulator of hedgehog signaling.
      
 0.471
HSPA4
Heat shock 70 kDa protein 4.
    
   0.416
HSPA4L
Heat shock 70 kDa protein 4L.
    
   0.416
HSPH1
Heat shock protein 105 kDa isoform X1.
    
   0.416
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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