STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRIK2Glutamate receptor ionotropic, kainate 2. (908 aa)    
Predicted Functional Partners:
GRIK4
Glutamate receptor ionotropic, kainate 4.
  
 
0.755
GRIA3
LOW QUALITY PROTEIN: glutamate receptor 3.
  
0.478
GRIA2
Glutamate receptor 2 isoform X1.
  
0.469
GRIA1
Glutamate receptor 1 isoform X2.
  
0.467
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
0.450
GRM8
Metabotropic glutamate receptor 8.
      
 0.441
GRM4
Metabotropic glutamate receptor 4 isoform X1.
      
 0.441
GRIN2A
Glutamate receptor ionotropic, NMDA 2A.
   
0.430
SCN4B
Voltage-gated sodium channel type IV beta.
     
 0.429
GRIN2B
Glutamate receptor ionotropic, NMDA 2B.
   
0.425
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.