Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
HPDL4-hydroxyphenylpyruvate dioxygenase-like protein. (392 aa)    
Predicted Functional Partners:
HGD
Homogentisate 1,2-dioxygenase isoform X1.
  
 0.952
TAT
Tyrosine aminotransferase isoform X1.
   
 
 0.776
GSTZ1
Maleylacetoacetate isomerase isoform X2.
  
  
 0.704
FAH
Fumarylacetoacetase.
 
  
 0.686
PCCB
LOW QUALITY PROTEIN: propionyl-CoA carboxylase beta chain, mitochondrial.
  
 
 0.622
LOC103815231
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like.
  
 
 0.622
MCCC2
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
  
 
 0.622
GLOD5
Glyoxalase domain containing 5.
      
 0.609
MCEE
Methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
    
 0.609
GOT2
Aspartate aminotransferase, mitochondrial.
  
 
 0.584
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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