Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPL14Large subunit ribosomal protein L14e. (178 aa)    
Predicted Functional Partners:
RPL18A
Large subunit ribosomal protein L18Ae.
   
 0.999
RPL7A
Large subunit ribosomal protein L7Ae.
  
 0.999
RPL30
Large subunit ribosomal protein L30e.
  
 0.999
RPL9
Large subunit ribosomal protein L9e.
  
 0.999
RPL6
60S ribosomal protein L6 isoform X2.
   
 0.999
RPL13
Large subunit ribosomal protein L13e.
   
 0.999
RPL4
Large subunit ribosomal protein L4e.
  
 0.999
RPL8
Ribosomal protein L8.
  
 0.999
RPL5
Ribosomal protein L5.
  
 0.999
RPL31
Large subunit ribosomal protein L31e.
   
 0.998
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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