STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXNDC5Thioredoxin domain-containing protein 5. (330 aa)    
Predicted Functional Partners:
ERO1A
ERO1-like protein alpha.
   
 0.950
ERO1B
ERO1-like protein beta.
   
 0.948
PRDX4
Peroxiredoxin 4.
  
 0.904
HSPA5
Endoplasmic reticulum chaperone BiP.
  
 0.876
JCHAIN
Immunoglobulin J chain.
   
  
 0.707
ENSSCAP00000002133
ENHANCER OF AG-4 protein 2-like.
   
 0.690
BLOC1S6
Biogenesis of lysosome-related organelles complex 1 subunit 6.
     
  0.689
HSP90B1
Heat shock protein 90kDa beta.
   
 0.664
DNAJC3
DnaJ homolog subfamily C member 3.
   
 0.657
GMPPB
Mannose-1-phosphate guanyltransferase beta.
  
 
 0.631
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.