Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RANBP9Ran-binding protein 9 isoform X1. (540 aa)    
Predicted Functional Partners:
WDR26
WD repeat-containing protein 26 isoform X2.
   
 0.958
GID8
Glucose-induced degradation protein 8 homolog.
   
 0.945
RMND5A
E3 ubiquitin-protein transferase RMND5A.
  
 0.936
MKLN1
Muskelin.
   
 0.933
ARMC8
Armadillo repeat-containing protein 8 isoform X1.
   
 0.902
MAEA
Macrophage erythroblast attacher.
    
 0.899
GID4
Glucose-induced degradation protein 4 homolog.
    
 0.887
YPEL5
Protein yippee-like 5.
   
 
 0.846
UBE2H
Ubiquitin conjugating enzyme E2 H.
   
 
 0.764
CFAP410
Cilia- and flagella-associated protein 410.
    
   0.664
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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