STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHPSDeoxyhypusine synthase. (225 aa)    
Predicted Functional Partners:
DOHH
Deoxyhypusine monooxygenase.
   
 0.986
EIF5A2
Eukaryotic translation initiation factor 5A-2.
   
 0.953
ENSSCAP00000002947
annotation not available
   
 0.949
RPL9
Large subunit ribosomal protein L9e.
   
 
 0.864
SH3BP5
SH3 domain-binding protein 5.
      
 0.692
ENSSCAP00000001605
annotation not available
    
   0.661
MAPK1
Mitogen-activated protein kinase 1/3.
    
   0.661
ISM2
Isthmin-2.
   
  
 0.651
SMS
Spermine synthase.
  
  
 0.640
SRM
Spermidine synthase.
  
  
 0.615
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.