STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLNS1AChloride channel, nucleotide-sensitive, 1A. (114 aa)    
Predicted Functional Partners:
WDR77
Methylosome protein 50.
   
 0.997
SNRPD1
Small nuclear ribonucleoprotein Sm D1 isoform X1.
   
 0.984
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.980
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.976
SNRPF
Small nuclear ribonucleoprotein F.
   
 0.968
SNRPE
Small nuclear ribonucleoprotein E.
   
 0.959
SNRPB
Small nuclear ribonucleoprotein-associated proteins B and B.
    
 0.957
LSM3
U6 snRNA-associated Sm-like protein LSm3.
   
 
 0.943
LSM6
U6 snRNA-associated Sm-like protein LSm6.
   
 
 0.938
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.906
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.