Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEP104Centrosomal protein of 104 kDa. (940 aa)    
Predicted Functional Partners:
CEP128
Centrosomal protein 128.
      
 0.861
ENKD1
Enkurin domain-containing protein 1.
      
 0.702
CEP290
Centrosomal protein 290.
      
 0.685
MPHOSPH9
M-phase phosphoprotein 9 isoform X1.
      
 0.685
ARL13B
ADP-ribosylation factor-like protein 13B isoform X1.
      
 0.668
CEP164
Centrosomal protein of 164 kDa isoform X1.
      
 0.651
TTLL6
Tubulin polyglutamylase TTLL6/13.
      
 0.650
CEP89
Centrosomal protein of 89 kDa isoform X2.
      
 0.615
CEP78
Centrosomal protein of 78 kDa.
      
 0.615
KIAA0556
Protein KIAA0556 homolog isoform X1.
      
 0.609
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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