STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APBA3Amyloid-beta A4 precursor protein-binding family A member 3. (723 aa)    
Predicted Functional Partners:
CASK
Peripheral plasma membrane protein CASK isoform X10.
   
 0.901
APP
Amyloid-beta precursor protein isoform X1.
   
 
 0.880
HIF1AN
Hypoxia-inducible factor 1-alpha inhibitor (HIF hydroxylase).
    
 
 0.868
MPP1
MAGUK 55 kDa erythrocyte membrane protein.
   
 0.810
STXBP1
Syntaxin-binding protein 1 isoform X1.
   
 0.780
MPP6
MAGUK p55 subfamily member 6 isoform X1.
   
 0.759
DNAJC17
DnaJ homolog subfamily C member 17 isoform X2.
      
 0.686
IBTK
Inhibitor of Bruton tyrosine kinase isoform X2.
      
 0.683
STXBP3
Syntaxin-binding protein 3 isoform X1.
    
 0.677
LIN7C
Protein lin-7 homolog C.
    
 0.671
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.