STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001280annotation not available (255 aa)    
Predicted Functional Partners:
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.995
CELF1
CUGBP Elav-like family member 1 isoform X1.
   
 
 0.960
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D-like.
   
 0.958
EIF4A3
Eukaryotic initiation factor 4A-III.
   
 0.956
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L-like.
   
 0.944
DDX5
Probable ATP-dependent RNA helicase DDX5 isoform X1.
   
 0.935
PTBP2
Polypyrimidine tract-binding protein 2 isoform X2.
   
 0.930
ANXA2
Annexin A2.
    
 
 0.929
KHDRBS1
KH domain-containing, RNA-binding, signal transduction-associated protein 1.
   
 
 0.927
RBMX
RNA binding motif protein X-linked.
   
 0.926
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.