KCTD14 protein (Serinus canaria) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

KCTD14

BTB/POZ domain-containing protein KCTD14 isoform X2. (246 aa)

Predicted Functional Partners:

TMEM184A

0.883

SMIM3

0.662

STK16

0.652

NAGPA

0.604

TMEM184B

0.603

ENSSCAP00000004904

0.599

KCTD10

0.594

KCTD9

0.495

KCTD6

0.471

PWWP3A

0.467

Your Current Organism:

Serinus canaria

NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSCAP00000004904	KCTD14	ENSSCAP00000004904	ENSSCAP00000001304	annotation not available	BTB/POZ domain-containing protein KCTD14 isoform X2.	0.599
ENSSCAP00000004904	SMIM3	ENSSCAP00000004904	ENSSCAP00000016259	annotation not available	Small integral membrane protein 3.	0.567
KCTD10	KCTD14	ENSSCAP00000008284	ENSSCAP00000001304	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 isoform X1.	BTB/POZ domain-containing protein KCTD14 isoform X2.	0.594
KCTD10	KCTD6	ENSSCAP00000008284	ENSSCAP00000008064	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 isoform X1.	BTB/POZ domain-containing protein KCTD6.	0.432
KCTD14	ENSSCAP00000004904	ENSSCAP00000001304	ENSSCAP00000004904	BTB/POZ domain-containing protein KCTD14 isoform X2.	annotation not available	0.599
KCTD14	KCTD10	ENSSCAP00000001304	ENSSCAP00000008284	BTB/POZ domain-containing protein KCTD14 isoform X2.	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 isoform X1.	0.594
KCTD14	KCTD6	ENSSCAP00000001304	ENSSCAP00000008064	BTB/POZ domain-containing protein KCTD14 isoform X2.	BTB/POZ domain-containing protein KCTD6.	0.471
KCTD14	KCTD9	ENSSCAP00000001304	ENSSCAP00000023919	BTB/POZ domain-containing protein KCTD14 isoform X2.	BTB/POZ domain-containing protein KCTD9.	0.495
KCTD14	NAGPA	ENSSCAP00000001304	ENSSCAP00000018073	BTB/POZ domain-containing protein KCTD14 isoform X2.	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.	0.604
KCTD14	PWWP3A	ENSSCAP00000001304	ENSSCAP00000008420	BTB/POZ domain-containing protein KCTD14 isoform X2.	PWWP domain-containing DNA repair factor 3A isoform X1.	0.467
KCTD14	SMIM3	ENSSCAP00000001304	ENSSCAP00000016259	BTB/POZ domain-containing protein KCTD14 isoform X2.	Small integral membrane protein 3.	0.662
KCTD14	STK16	ENSSCAP00000001304	ENSSCAP00000018667	BTB/POZ domain-containing protein KCTD14 isoform X2.	Serine/threonine-protein kinase 16 isoform X1.	0.652
KCTD14	TMEM184A	ENSSCAP00000001304	ENSSCAP00000012795	BTB/POZ domain-containing protein KCTD14 isoform X2.	Transmembrane protein 184A isoform X3.	0.883
KCTD14	TMEM184B	ENSSCAP00000001304	ENSSCAP00000005476	BTB/POZ domain-containing protein KCTD14 isoform X2.	Transmembrane protein 184B isoform X1.	0.603
KCTD6	KCTD10	ENSSCAP00000008064	ENSSCAP00000008284	BTB/POZ domain-containing protein KCTD6.	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 isoform X1.	0.432
KCTD6	KCTD14	ENSSCAP00000008064	ENSSCAP00000001304	BTB/POZ domain-containing protein KCTD6.	BTB/POZ domain-containing protein KCTD14 isoform X2.	0.471
KCTD9	KCTD14	ENSSCAP00000023919	ENSSCAP00000001304	BTB/POZ domain-containing protein KCTD9.	BTB/POZ domain-containing protein KCTD14 isoform X2.	0.495
NAGPA	KCTD14	ENSSCAP00000018073	ENSSCAP00000001304	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.	BTB/POZ domain-containing protein KCTD14 isoform X2.	0.604
PWWP3A	KCTD14	ENSSCAP00000008420	ENSSCAP00000001304	PWWP domain-containing DNA repair factor 3A isoform X1.	BTB/POZ domain-containing protein KCTD14 isoform X2.	0.467
SMIM3	ENSSCAP00000004904	ENSSCAP00000016259	ENSSCAP00000004904	Small integral membrane protein 3.	annotation not available	0.567