Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GRK7Rhodopsin kinase. (551 aa)    
Predicted Functional Partners:
LOC103823301
Green-sensitive opsin.
   
 0.983
RHO
Rhodopsin isoform X2.
   
 0.983
CXCR2
C-X-C chemokine receptor type 2.
    
 0.914
CXCR4
C-X-C chemokine receptor type 4.
    
 0.913
LOC103812980
C-C chemokine receptor type 5-like.
    
  0.910
ARRB1
Beta-arrestin-1 isoform X1.
   
 0.898
SAG
S-arrestin isoform X1.
   
 0.756
GNG11
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11.
    
 0.749
PDE6B
Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta.
   
 
 0.688
GUCA1A
Guanylyl cyclase-activating protein 1.
    
 0.634
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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