STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO48F-box only protein 48. (163 aa)    
Predicted Functional Partners:
PHF12
LOW QUALITY PROTEIN: PHD finger protein 12.
      
 0.878
LIN54
Protein lin-54 homolog isoform X1.
      
 0.684
FBXO47
F-box only protein 47.
      
 0.683
CNRIP1
CB1 cannabinoid receptor-interacting protein 1.
      
 0.682
CNBP
CCHC-type zinc finger nucleic acid binding protein.
      
 0.682
ANAPC15
Anaphase-promoting complex subunit 15 isoform X1.
      
 0.592
DCUN1D2
DCN1-like protein 2 isoform X2.
      
 0.576
DCUN1D1
DCN1-like protein 1/2.
      
 0.576
E2F7
Transcription factor E2F7 isoform X1.
      
 0.554
PNO1
RNA-binding protein PNO1.
      
 0.541
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.