STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF7RING-box protein 2 isoform X1. (114 aa)    
Predicted Functional Partners:
CUL5
Cullin 5.
    
 0.996
ELOC
Elongin-C.
   
 0.995
UBE2F
Ubiquitin-conjugating enzyme E2 F.
   
 0.983
CUL1
Cullin-1 isoform X1.
    
 0.980
UBE2C
Ubiquitin-conjugating enzyme E2 C.
    
 0.955
NEDD8
Ubiquitin-like protein Nedd8.
   
 0.943
UBXN7
UBX domain-containing protein 7.
    
 0.919
SKP1
S-phase kinase-associated protein 1.
   
 0.912
CUL2
Cullin 2.
    
 0.895
DDB1
DNA damage-binding protein 1.
    
 0.895
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.