STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASCC3Activating signal cointegrator 1 complex subunit 3 isoform X1. (2207 aa)    
Predicted Functional Partners:
ASCC2
Activating signal cointegrator 1 complex subunit 2.
    
 0.999
TRIP4
Activating signal cointegrator 1.
   
 0.997
ASCC1
Activating signal cointegrator 1 complex subunit 1.
    
 0.991
ZNF598
E3 ubiquitin-protein ligase ZNF598 isoform X1.
    
 0.930
PRPF8
Pre-mRNA-processing-splicing factor 8.
   
 0.848
MLH1
DNA mismatch repair protein Mlh1 isoform X1.
    
 
 0.797
PRPF6
Pre-mRNA-processing factor 6.
   
 0.779
SNRNP40
U5 small nuclear ribonucleoprotein 40 kDa protein.
   
 0.760
RPS3
Small subunit ribosomal protein S3e.
   
 
 0.758
SNRPF
Small nuclear ribonucleoprotein F.
   
 0.751
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.