STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103826648Cytosolic phospholipase A2 epsilon-like. (822 aa)    
Predicted Functional Partners:
MAPK1
Mitogen-activated protein kinase 1/3.
    
  0.919
PLD1
Phospholipase D1 isoform X1.
     
 0.705
CHPT1
Diacylglycerol cholinephosphotransferase.
     
 0.693
PAFAH2
Platelet-activating factor acetylhydrolase 2, cytoplasmic.
     
 0.690
PLA2G7
Platelet-activating factor acetylhydrolase isoform X1.
     
 0.690
PAFAH1B1
Platelet-activating factor acetylhydrolase IB subunit alpha.
     
  0.683
PAFAH1B2
Platelet-activating factor acetylhydrolase IB subunit beta/gamma.
     
  0.682
GNA11
Guanine nucleotide-binding protein subunit alpha-11.
     
  0.682
ENSSCAP00000020859
Guanine nucleotide-binding protein G(q) subunit alpha.
     
  0.682
GDPD1
Lysophospholipase D GDPD1.
     
  0.675
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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