Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PRKCDProtein kinase C delta type isoform X1. (683 aa)    
Predicted Functional Partners:
CARD9
Caspase recruitment domain-containing protein 9 isoform X1.
    
 0.963
PRKCB
Classical protein kinase C beta type.
  
 
 
0.958
PRKCA
Protein kinase C alpha type isoform X3.
  
 
 
0.957
MAPK1
Mitogen-activated protein kinase 1/3.
    
0.924
MAPK9
Mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase).
    
0.919
BRAF
B-Raf proto-oncogene serine/threonine-protein kinase.
    
 
0.915
RAF1
RAF proto-oncogene serine/threonine-protein kinase isoform X1.
    
 
0.915
MAPK10
Mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase).
    
0.914
MAPK8
Mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase).
    
0.914
PLCB2
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X1.
   
 
 0.910
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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