STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIM1Single-minded homolog 1. (766 aa)    
Predicted Functional Partners:
ARNT2
Aryl hydrocarbon receptor nuclear translocator 2 isoform X3.
    
 
 0.708
ARNT
Aryl hydrocarbon receptor nuclear translocator isoform X1.
    
 
 0.708
FOXG1
Forkhead box G1.
    
 
 0.574
MC4R
Melanocortin 4 receptor.
      
 0.528
TRH
Thyrotropin releasing hormone.
      
 0.528
AGRP
Agouti related protein.
      
 0.527
CDK7
Cyclin-dependent kinase 7 isoform X1.
    
   0.520
CCNH
Cyclin H.
    
   0.472
PCDH15
Protocadherin related 15.
      
 0.470
ENSSCAP00000015671
VIP peptides-like.
      
 0.470
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.