STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNAB2Potassium voltage-gated channel subfamily A regulatory beta subunit 2. (383 aa)    
Predicted Functional Partners:
KCNF1
Potassium voltage-gated channel subfamily F member 1.
   
 0.763
NUP133
Nuclear pore complex protein Nup133.
   
 0.753
NUP107
Nuclear pore complex protein Nup107.
   
 0.748
NUP85
Nuclear pore complex protein Nup85.
    
 0.725
SEC13
Protein transport protein SEC13.
    
 0.718
KCNG4
Potassium voltage-gated channel subfamily G member 4.
    
 0.711
KCNV1
Potassium voltage-gated channel subfamily V member 1.
   
 0.640
LOC103819556
Potassium voltage-gated channel subfamily A member 6.
   
 0.639
KCNA3
Potassium voltage-gated channel Shaker-related subfamily A member 3.
   
 0.632
KCNA2
Potassium voltage-gated channel Shaker-related subfamily A member 2.
   
 0.632
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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