STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB38Zinc finger and BTB domain-containing protein 38. (1191 aa)    
Predicted Functional Partners:
RBBP6
E3 ubiquitin-protein ligase RBBP6 isoform X2.
    
 0.720
MEGF9
Multiple epidermal growth factor-like domains protein 9.
    
 
 0.576
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X4.
    
 0.538
HACD4
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X1.
    
 
 0.532
CDH13
Cadherin 13, H-cadherin.
      
 0.517
ACSS3
Acyl-CoA synthetase short-chain family member 3, mitochondrial.
    
 
 0.498
CTBP2
C-terminal-binding protein 2 isoform X1.
    
 
 0.489
MORC3
MORC family CW-type zinc finger protein 3.
      
 0.476
ZZZ3
ZZ-type zinc finger-containing protein 3 isoform X1.
   
 
 0.475
RANBP3L
RAN binding protein 3 like.
      
 0.465
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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