STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103817975Proline dehydrogenase 1, mitochondrial-like isoform X1. (591 aa)    
Predicted Functional Partners:
ALDH4A1
Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial.
  
 0.955
PYCR3
Pyrroline-5-carboxylate reductase 3 isoform X1.
   
 0.947
PYCR1
Pyrroline-5-carboxylate reductase 1, mitochondrial.
   
 0.947
P4HA2
Prolyl 4-hydroxylase subunit alpha-2 isoform X2.
   
 
 0.910
P4HA3
Prolyl 4-hydroxylase subunit alpha 3.
   
 
 0.910
P4HA1
Prolyl 4-hydroxylase subunit alpha-1 isoform X1.
   
 
 0.910
LAP3
Cytosol aminopeptidase.
     
  0.900
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
   
 
 0.895
OAT
Ornithine aminotransferase, mitochondrial.
  
 
 0.884
NFKBID
NF-kappa-B inhibitor delta-like.
   
  
 0.770
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.