Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BRIX1Ribosome biogenesis protein BRX1 homolog. (315 aa)    
Predicted Functional Partners:
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
 
 0.997
MRTO4
MRNA turnover protein 4 homolog.
   
 
 0.992
PUM3
Pumilio homology domain family member 6.
   
 
 0.992
RPF2
Ribosome production factor 2 homolog.
   
 
 0.991
NOP58
Nucleolar protein 58 isoform X1.
   
 
 0.991
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.989
RPF1
Ribosome production factor 1.
   
 
 0.987
RSL24D1
Probable ribosome biogenesis protein RLP24.
   
 
 0.986
RSL1D1
Ribosomal L1 domain-containing protein 1.
   
 
 0.986
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.986
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.