STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108964112V-type proton ATPase subunit S1-like. (119 aa)    
Predicted Functional Partners:
ATP6V0B
ATPase H+ transporting V0 subunit b.
   
 0.923
ATP6V1E1
V-type H+-transporting ATPase subunit E.
   
 0.913
ATP6V1H
V-type H+-transporting ATPase subunit H.
   
 0.904
ATP6V0C
V-type H+-transporting ATPase 16kDa proteolipid subunit.
   
 0.902
ATP6AP2
ATPase H+ transporting accessory protein 2.
   
 0.890
ATP6V1B1
ATPase H+ transporting V1 subunit B1.
   
 0.889
ATP6V1A
V-type proton ATPase catalytic subunit A.
   
 0.887
ENSSCAP00000011641
annotation not available
   
 0.882
ATP6V0D2
V-type H+-transporting ATPase subunit d.
   
 0.816
ATP6V0D1
V-type H+-transporting ATPase subunit d.
   
 0.816
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.