STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
METTL6Methyltransferase-like protein 6. (292 aa)    
Predicted Functional Partners:
SARS1
Serine--tRNA ligase, cytoplasmic isoform X3.
    
 
 0.909
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X4.
    
   0.724
EAF1
ELL-associated factor 1.
      
 0.686
RERG
Ras-related and estrogen-regulated growth inhibitor.
      
 0.669
RSPRY1
RING finger and SPRY domain-containing protein 1.
   
 
 0.658
TRMT10A
TRNA methyltransferase 10 homolog A isoform X1.
   
  
 0.650
DALRD3
DALR anticodon binding domain containing 3.
    
 
 0.616
GPATCH3
G-patch domain containing 3.
      
 0.615
THRAP3
Thyroid hormone receptor-associated protein 3 isoform X1.
    
 
 0.615
EFCAB1
EF-hand calcium-binding domain-containing protein 1.
    
 
 0.613
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.