Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSBP2Oxysterol binding protein 2. (902 aa)    
Predicted Functional Partners:
VAPA
VAMP associated protein A.
    
 
 0.847
VAPB
VAMP associated protein B and C.
    
 
 0.827
FNIP2
Folliculin-interacting protein 2 isoform X2.
      
 0.585
GAK
Cyclin-G-associated kinase isoform X1.
   
 
 0.574
IARS1
Isoleucine--tRNA ligase, cytoplasmic isoform X1.
      
 0.552
EIF4ENIF1
Eukaryotic translation initiation factor 4E transporter isoform X1.
    
 
 0.539
CHAF1B
Chromatin assembly factor 1 subunit B.
      
 0.528
MOSPD2
Motile sperm domain-containing protein 2 isoform X1.
    
 
 0.525
LZTS1
LOW QUALITY PROTEIN: leucine zipper putative tumor suppressor 1.
      
 0.507
PLEK2
Pleckstrin-2.
   
  
 0.477
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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