close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001402annotation not available (163 aa)    
Predicted Functional Partners:
UBE2V1
LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 variant 1.
   
 0.991
MYSM1
Histone H2A deubiquitinase MYSM1.
   
 0.973
UBXN7
UBX domain-containing protein 7.
    
 0.970
ENSSCAP00000002502
annotation not available
   
 0.946
ENSSCAP00000023533
annotation not available
   
 0.946
SCP2
Non-specific lipid-transfer protein.
    
  0.933
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X4.
   
 0.898
TRAF7
E3 ubiquitin-protein ligase TRAF7.
    
 0.891
NBR1
Next to BRCA1 gene 1 protein isoform X1.
   
 0.888
SGTA
Small glutamine-rich tetratricopeptide repeat-containing protein alpha.
   
 0.840
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.