Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001402annotation not available (163 aa)    
Predicted Functional Partners:
SGTA
Small glutamine-rich tetratricopeptide repeat-containing protein alpha.
   
 0.944
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X4.
   
 0.906
GET4
Golgi to ER traffic protein 4 homolog.
    
 0.906
ENSSCAP00000017553
annotation not available
    
 0.906
UBXN7
UBX domain-containing protein 7.
    
 0.861
FAF2
FAS-associated factor 2.
    
 
 0.861
MYSM1
Histone H2A deubiquitinase MYSM1.
   
 0.834
RPL21
Large subunit ribosomal protein L21e.
   
 0.803
GET1
Tail-anchored protein insertion receptor WRB.
    
 0.802
RPL32
Large subunit ribosomal protein L32e.
   
 0.792
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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