STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD1Cell cycle checkpoint protein RAD1. (344 aa)    
Predicted Functional Partners:
HUS1
Checkpoint protein HUS1.
    
 0.999
ATR
Serine/threonine-protein kinase ATR.
    
 0.990
RAD17
Cell cycle checkpoint protein RAD17 isoform X2.
   
 0.980
WRN
Werner syndrome ATP-dependent helicase isoform X2.
   
 0.975
SLF1
SMC5-SMC6 complex localization factor protein 1 isoform X1.
    
 0.974
RFC4
Replication factor C subunit 2/4.
   
 0.969
RFC5
LOW QUALITY PROTEIN: replication factor C subunit 5.
   
 0.942
RFC2
Replication factor C subunit 2/4.
   
 0.936
RHNO1
RAD9, HUS1, RAD1-interacting nuclear orphan protein 1.
    
  0.936
RAD9B
RAD9 checkpoint clamp component B.
    
 0.933
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.