STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD1Cell cycle checkpoint protein RAD1. (344 aa)    
Predicted Functional Partners:
HUS1
Checkpoint protein HUS1.
    
 0.997
ATR
Serine/threonine-protein kinase ATR.
    
 0.991
RAD17
Cell cycle checkpoint protein RAD17 isoform X2.
   
 0.987
RHNO1
RAD9, HUS1, RAD1-interacting nuclear orphan protein 1.
   
 0.974
RAD9B
RAD9 checkpoint clamp component B.
    
 0.973
RAD9A
Cell cycle checkpoint control protein RAD9A.
    
 0.973
RFC4
Replication factor C subunit 2/4.
   
 0.962
ATM
Serine-protein kinase ATM isoform X1.
    
 0.932
ZBTB14
Zinc finger and BTB domain-containing protein 14.
    
   0.929
RPA1
Replication protein A 70 kDa DNA-binding subunit.
    
 0.925
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.