Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001414LOW QUALITY PROTEIN: dynein regulatory complex protein 10-like. (198 aa)    
Predicted Functional Partners:
TTC25
Tetratricopeptide repeat domain 25.
   
 
 0.915
ENSSCAP00000005425
annotation not available
      
 0.884
RSPH3
Radial spoke head protein 3 homolog.
   
 
 0.871
IQUB
IQ and ubiquitin-like domain-containing protein.
   
 
 0.864
FAM183A
Protein FAM183A.
    
 
 0.854
TEKT2
Tektin-2 isoform X1.
   
 
 0.835
ENSSCAP00000014214
annotation not available
   
   0.826
NME8
Thioredoxin domain-containing protein 3.
   
   0.826
ARMC3
Armadillo repeat-containing protein 3.
   
 
 0.818
ENSSCAP00000018880
annotation not available
   
 
 0.818
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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