STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001428annotation not available (249 aa)    
Predicted Functional Partners:
LOC108962632
Killer cell lectin-like receptor subfamily F member 1.
   
0.719
ENSSCAP00000022448
annotation not available
   
 0.719
CD4
T-cell surface glycoprotein CD4.
   
 0.585
CD80
T-lymphocyte activation antigen CD80.
   
 
 0.555
CD86
T-lymphocyte activation antigen CD86.
   
 
 0.539
IFNG
Interferon gamma.
   
  
 0.538
CCR7
C-C chemokine receptor type 7.
   
 
 0.512
TMPRSS3
Transmembrane protease serine 3.
    
 0.510
CD5
CD5 molecule.
   
 
 0.496
KLRG1
Killer cell lectin-like receptor subfamily G member 1.
   
0.454
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.