STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF9Transcription initiation factor TFIID subunit 9B isoform X1. (253 aa)    
Predicted Functional Partners:
LOC103825348
Transcription initiation factor TFIID subunit 6-like.
   
 0.999
TAF10
LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 10.
   
 0.999
TAF2
Transcription initiation factor TFIID subunit 2 isoform X1.
    
 0.999
TAF13
Transcription initiation factor TFIID subunit 13.
   
 0.999
TAF8
Transcription initiation factor TFIID subunit 8.
   
 0.999
TAF12
Transcription initiation factor TFIID subunit 12.
   
 0.999
TAF11
Transcription initiation factor TFIID subunit 11 isoform X1.
   
 0.999
TAF1
Transcription initiation factor TFIID subunit 1 isoform X1.
    
 0.999
SUPT3H
Transcription initiation protein SPT3 homolog isoform X1.
   
 0.998
SGF29
SAGA-associated factor 29 isoform X1.
   
 0.998
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.