Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001431annotation not available (150 aa)    
Predicted Functional Partners:
ENSSCAP00000008817
annotation not available
    
   0.832
TRAPPC2L
Trafficking protein particle complex subunit 2-like protein.
    
 0.739
CLPX
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X4.
      
 0.705
TRAPPC12
Trafficking protein particle complex subunit 12.
     
 0.605
TRAPPC13
Trafficking protein particle complex 13.
     
 0.598
TRAPPC4
Trafficking protein particle complex subunit 4.
     
 0.574
RUFY4
RUN and FYVE domain-containing protein 4 isoform X1.
    
   0.570
TRAPPC8
Trafficking protein particle complex subunit 8 isoform X1.
     
 0.567
TRAPPC10
Trafficking protein particle complex subunit 10.
     
 0.566
NCAPH
Condensin complex subunit 2 isoform X1.
      
 0.562
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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