STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001431annotation not available (150 aa)    
Predicted Functional Partners:
TRAPPC2
Trafficking protein particle complex subunit 2.
    
 0.842
TRAPPC12
Trafficking protein particle complex subunit 12.
     
 0.817
TRAPPC8
Trafficking protein particle complex subunit 8 isoform X1.
     
 0.814
TRAPPC4
Trafficking protein particle complex subunit 4.
     
 0.814
TRAPPC10
Trafficking protein particle complex subunit 10.
     
 0.812
TRAPPC2L
Trafficking protein particle complex subunit 2-like protein.
    
 0.766
TRAPPC13
Trafficking protein particle complex 13.
     
 0.726
TRAPPC6B
Trafficking protein particle complex subunit 6B.
     
 0.723
TRAPPC11
Trafficking protein particle complex subunit 11.
     
 0.722
TRAPPC9
Trafficking protein particle complex subunit 9 isoform X1.
     
 0.720
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.